Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rbm28Q8CGC6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbm28Q8CGC6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbm28Q8CGC6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rbm28Q8CGC6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbm28Q8CGC6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbm28Q8CGC6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Rbm28Q8CGC6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rbm28Q8CGC6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbm28Q8CGC6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbm28Q8CGC6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Gm12895-201ENSMUST00000122214 226 ntBASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Birc2-201ENSMUST00000054878 378 ntBASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rbm28Q8CGC6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbm28Q8CGC6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms