Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Smc4Q8CG47 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.2■□□□□ 0.82
Smc4Q8CG47 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc4Q8CG47 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc4Q8CG47 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc4Q8CG47 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
Smc4Q8CG47 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc4Q8CG47 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smc4Q8CG47 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc4Q8CG47 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.18■□□□□ 0.82
Smc4Q8CG47 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc4Q8CG47 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc4Q8CG47 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc4Q8CG47 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc4Q8CG47 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc4Q8CG47 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc4Q8CG47 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smc4Q8CG47 Gm15165-201ENSMUST00000118140 502 ntBASIC20.18■□□□□ 0.82
Smc4Q8CG47 Gm12644-201ENSMUST00000119935 606 ntBASIC20.18■□□□□ 0.82
Smc4Q8CG47 Gm36967-201ENSMUST00000193814 266 ntBASIC20.18■□□□□ 0.82
Smc4Q8CG47 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc4Q8CG47 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.18■□□□□ 0.82
Smc4Q8CG47 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc4Q8CG47 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Smc4Q8CG47 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc4Q8CG47 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Smc4Q8CG47 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smc4Q8CG47 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc4Q8CG47 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smc4Q8CG47 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.17■□□□□ 0.82
Smc4Q8CG47 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.17■□□□□ 0.82
Smc4Q8CG47 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.17■□□□□ 0.82
Smc4Q8CG47 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Smc4Q8CG47 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc4Q8CG47 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Gm28659-201ENSMUST00000188013 759 ntBASIC20.15■□□□□ 0.82
Smc4Q8CG47 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Smc4Q8CG47 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Smc4Q8CG47 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms