Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Gm12933-201ENSMUST00000120203 872 ntBASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Gm37025-201ENSMUST00000195159 829 ntBASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Prob1-201ENSMUST00000097619 3021 ntBASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Gm12382-201ENSMUST00000122005 922 ntBASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28bQ8CEG5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc28bQ8CEG5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Gm27405-201ENSMUST00000184201 112 ntBASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28bQ8CEG5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28bQ8CEG5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28bQ8CEG5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.22■□□□□ 0.19
Ccdc28bQ8CEG5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc28bQ8CEG5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms