Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Q8CD60 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.26■□□□□ 0.35
Q8CD60 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.26■□□□□ 0.35
Q8CD60 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Q8CD60 Gm29518-201ENSMUST00000190858 372 ntBASIC17.26■□□□□ 0.35
Q8CD60 Gm17808-201ENSMUST00000200859 894 ntBASIC17.26■□□□□ 0.35
Q8CD60 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Q8CD60 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Q8CD60 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
Q8CD60 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8CD60 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.26■□□□□ 0.35
Q8CD60 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Q8CD60 Gm25016-201ENSMUST00000158399 131 ntBASIC17.25■□□□□ 0.35
Q8CD60 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Q8CD60 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Q8CD60 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Q8CD60 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Q8CD60 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.25■□□□□ 0.35
Q8CD60 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8CD60 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Q8CD60 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Q8CD60 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Q8CD60 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Q8CD60 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.24■□□□□ 0.35
Q8CD60 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8CD60 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.23■□□□□ 0.35
Q8CD60 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Q8CD60 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Q8CD60 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Q8CD60 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Q8CD60 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Q8CD60 Gm11950-201ENSMUST00000121615 838 ntBASIC17.23■□□□□ 0.35
Q8CD60 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Q8CD60 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.23■□□□□ 0.35
Q8CD60 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Q8CD60 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8CD60 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Q8CD60 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Q8CD60 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q8CD60 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms