Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrtm1Q8BXQ3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrtm1Q8BXQ3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrtm1Q8BXQ3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrtm1Q8BXQ3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Lrtm1Q8BXQ3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lrtm1Q8BXQ3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lrtm1Q8BXQ3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lrtm1Q8BXQ3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
Lrtm1Q8BXQ3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrtm1Q8BXQ3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrtm1Q8BXQ3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Gm15794-201ENSMUST00000120182 631 ntBASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Gm33142-201ENSMUST00000193913 867 ntBASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrtm1Q8BXQ3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrtm1Q8BXQ3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lrtm1Q8BXQ3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrtm1Q8BXQ3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms