Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm37584-201ENSMUST00000193595 1290 ntBASIC22.46■■□□□ 1.19
Usp40Q8BWR4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC22.46■■□□□ 1.19
Usp40Q8BWR4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC22.46■■□□□ 1.19
Usp40Q8BWR4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp40Q8BWR4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Usp40Q8BWR4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Usp40Q8BWR4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Usp40Q8BWR4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Usp40Q8BWR4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Usp40Q8BWR4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp40Q8BWR4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp40Q8BWR4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC22.45■■□□□ 1.19
Usp40Q8BWR4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Usp40Q8BWR4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC22.45■■□□□ 1.18
Usp40Q8BWR4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
Usp40Q8BWR4 Gm12497-201ENSMUST00000138778 237 ntBASIC22.44■■□□□ 1.18
Usp40Q8BWR4 Gm25406-201ENSMUST00000157599 105 ntBASIC22.44■■□□□ 1.18
Usp40Q8BWR4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Usp40Q8BWR4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC22.44■■□□□ 1.18
Usp40Q8BWR4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp40Q8BWR4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp40Q8BWR4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp40Q8BWR4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Usp40Q8BWR4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp40Q8BWR4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Usp40Q8BWR4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC22.44■■□□□ 1.18
Usp40Q8BWR4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Gm8097-201ENSMUST00000117903 829 ntBASIC22.43■■□□□ 1.18
Usp40Q8BWR4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Usp40Q8BWR4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp40Q8BWR4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp40Q8BWR4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Usp40Q8BWR4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp40Q8BWR4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp40Q8BWR4 Gm11780-201ENSMUST00000136880 516 ntBASIC22.42■■□□□ 1.18
Usp40Q8BWR4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC22.42■■□□□ 1.18
Usp40Q8BWR4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Usp40Q8BWR4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Usp40Q8BWR4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Usp40Q8BWR4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp40Q8BWR4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Usp40Q8BWR4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Mir5126-201ENSMUST00000175513 77 ntBASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Gm5712-201ENSMUST00000199748 1043 ntBASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp40Q8BWR4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Gm7230-201ENSMUST00000173026 815 ntBASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
Usp40Q8BWR4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms