Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Chchd1-203ENSMUST00000224633 557 ntBASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Rarb-207ENSMUST00000225921 2756 ntBASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Mir8117-201ENSMUST00000184773 107 ntBASIC18.18■□□□□ 0.5
Snx17Q8BVL3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.18■□□□□ 0.5
Snx17Q8BVL3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.18■□□□□ 0.5
Snx17Q8BVL3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Mir3113-201ENSMUST00000175478 76 ntBASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx17Q8BVL3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Gm14057-201ENSMUST00000120631 482 ntBASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx17Q8BVL3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Gm8655-201ENSMUST00000221159 852 ntBASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx17Q8BVL3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Snx17Q8BVL3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Snx17Q8BVL3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx17Q8BVL3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Snx17Q8BVL3 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.14■□□□□ 0.49
Snx17Q8BVL3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Snx17Q8BVL3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.14■□□□□ 0.49
Snx17Q8BVL3 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.14■□□□□ 0.49
Snx17Q8BVL3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx17Q8BVL3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Snx17Q8BVL3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx17Q8BVL3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms