Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Gm7862-201ENSMUST00000121461 292 ntBASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scfd1Q8BRF7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Gm18733-201ENSMUST00000173950 856 ntBASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Gm7506-201ENSMUST00000207758 815 ntBASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scfd1Q8BRF7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scfd1Q8BRF7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Scfd1Q8BRF7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scfd1Q8BRF7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scfd1Q8BRF7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.69■□□□□ 0.58
Scfd1Q8BRF7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.69■□□□□ 0.58
Scfd1Q8BRF7 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.69■□□□□ 0.58
Scfd1Q8BRF7 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.69■□□□□ 0.58
Scfd1Q8BRF7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scfd1Q8BRF7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scfd1Q8BRF7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scfd1Q8BRF7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scfd1Q8BRF7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scfd1Q8BRF7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms