Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.94■□□□□ 0.14
Cpsf4Q8BQZ5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Gm6659-201ENSMUST00000174752 547 ntBASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4Q8BQZ5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4Q8BQZ5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms