Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pum3Q8BKS9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pum3Q8BKS9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pum3Q8BKS9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pum3Q8BKS9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pum3Q8BKS9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pum3Q8BKS9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pum3Q8BKS9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pum3Q8BKS9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.37■□□□□ 0.37
Pum3Q8BKS9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pum3Q8BKS9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Gm7284-201ENSMUST00000131667 944 ntBASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Gm27704-201ENSMUST00000185094 107 ntBASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pum3Q8BKS9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Gm14859-201ENSMUST00000117752 357 ntBASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Gm10052-201ENSMUST00000168019 960 ntBASIC17.35■□□□□ 0.37
Pum3Q8BKS9 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.35■□□□□ 0.37
Pum3Q8BKS9 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.35■□□□□ 0.37
Pum3Q8BKS9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Gm7729-201ENSMUST00000050143 801 ntBASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pum3Q8BKS9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pum3Q8BKS9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pum3Q8BKS9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pum3Q8BKS9 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.33■□□□□ 0.37
Pum3Q8BKS9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pum3Q8BKS9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms