Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp1Q8BJQ2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp1Q8BJQ2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp1Q8BJQ2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp1Q8BJQ2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp1Q8BJQ2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp1Q8BJQ2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp1Q8BJQ2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp1Q8BJQ2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Usp1Q8BJQ2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp1Q8BJQ2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp1Q8BJQ2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp1Q8BJQ2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp1Q8BJQ2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp1Q8BJQ2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Gm15165-201ENSMUST00000118140 502 ntBASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Gm44454-201ENSMUST00000198541 138 ntBASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp1Q8BJQ2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp1Q8BJQ2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.36■□□□□ 0.37
Usp1Q8BJQ2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms