Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdh20Q8BIZ0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Gm7791-201ENSMUST00000219066 539 ntBASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Il3ra-202ENSMUST00000223589 738 ntBASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh20Q8BIZ0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Gm17661-201ENSMUST00000170317 270 ntBASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Gm45058-201ENSMUST00000205810 766 ntBASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh20Q8BIZ0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms