Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf38Q8BI21 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf38Q8BI21 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf38Q8BI21 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Rnf38Q8BI21 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf38Q8BI21 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf38Q8BI21 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Rnf38Q8BI21 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.83■□□□□ 0.12
Rnf38Q8BI21 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf38Q8BI21 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Phf7-203ENSMUST00000226565 1971 ntBASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Timm23-208ENSMUST00000226683 750 ntBASIC15.82■□□□□ 0.12
Rnf38Q8BI21 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms