Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim65Q8BFW4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim65Q8BFW4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim65Q8BFW4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim65Q8BFW4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.62■□□□□ 0.41
Trim65Q8BFW4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Trim65Q8BFW4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim65Q8BFW4 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.62■□□□□ 0.41
Trim65Q8BFW4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim65Q8BFW4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim65Q8BFW4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Gm37722-201ENSMUST00000193757 208 ntBASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim65Q8BFW4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Gm11355-201ENSMUST00000121120 306 ntBASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim65Q8BFW4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Gm10013-201ENSMUST00000106074 672 ntBASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim65Q8BFW4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.58■□□□□ 0.41
Trim65Q8BFW4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.58■□□□□ 0.41
Trim65Q8BFW4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.58■□□□□ 0.41
Trim65Q8BFW4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trim65Q8BFW4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trim65Q8BFW4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim65Q8BFW4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim65Q8BFW4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim65Q8BFW4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim65Q8BFW4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trim65Q8BFW4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.58■□□□□ 0.4
Trim65Q8BFW4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Trim65Q8BFW4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim65Q8BFW4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim65Q8BFW4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim65Q8BFW4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim65Q8BFW4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim65Q8BFW4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim65Q8BFW4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim65Q8BFW4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim65Q8BFW4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim65Q8BFW4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim65Q8BFW4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms