Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc2Q80VA5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc2Q80VA5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc2Q80VA5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.85■□□□□ 0.45
Sh3tc2Q80VA5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc2Q80VA5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc2Q80VA5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Sh3tc2Q80VA5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3tc2Q80VA5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.84■□□□□ 0.45
Sh3tc2Q80VA5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3tc2Q80VA5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sh3tc2Q80VA5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Sh3tc2Q80VA5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Sh3tc2Q80VA5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.84■□□□□ 0.45
Sh3tc2Q80VA5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.84■□□□□ 0.45
Sh3tc2Q80VA5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3tc2Q80VA5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Sh3tc2Q80VA5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Sh3tc2Q80VA5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3tc2Q80VA5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3tc2Q80VA5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.83■□□□□ 0.45
Sh3tc2Q80VA5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Sh3tc2Q80VA5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3tc2Q80VA5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.83■□□□□ 0.45
Sh3tc2Q80VA5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Rprl3-201ENSMUST00000157400 290 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm44357-201ENSMUST00000195897 142 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm19658-201ENSMUST00000196231 138 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm44367-201ENSMUST00000196836 138 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm44350-201ENSMUST00000197197 138 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm44390-201ENSMUST00000197533 144 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm44313-201ENSMUST00000198018 138 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm44486-201ENSMUST00000198508 138 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm44454-201ENSMUST00000198541 138 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm44314-201ENSMUST00000199263 138 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm44394-201ENSMUST00000199558 138 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm44484-201ENSMUST00000199873 138 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm44466-201ENSMUST00000200264 138 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Gm44359-201ENSMUST00000200671 138 ntBASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3tc2Q80VA5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Gm13312-201ENSMUST00000119631 718 ntBASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Gm8000-201ENSMUST00000188378 592 ntBASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.82■□□□□ 0.44
Sh3tc2Q80VA5 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Gm44450-201ENSMUST00000199528 114 ntBASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3tc2Q80VA5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3tc2Q80VA5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3tc2Q80VA5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3tc2Q80VA5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.8■□□□□ 0.44
Sh3tc2Q80VA5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Sh3tc2Q80VA5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.8■□□□□ 0.44
Sh3tc2Q80VA5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.8■□□□□ 0.44
Sh3tc2Q80VA5 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.8■□□□□ 0.44
Sh3tc2Q80VA5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.8■□□□□ 0.44
Sh3tc2Q80VA5 Gm18421-201ENSMUST00000204122 625 ntBASIC17.8■□□□□ 0.44
Sh3tc2Q80VA5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms