Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Trim62Q80V85 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trim62Q80V85 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trim62Q80V85 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim62Q80V85 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim62Q80V85 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim62Q80V85 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Gm7367-201ENSMUST00000057611 492 ntBASIC16.97■□□□□ 0.31
Trim62Q80V85 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim62Q80V85 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim62Q80V85 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.97■□□□□ 0.31
Trim62Q80V85 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim62Q80V85 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim62Q80V85 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim62Q80V85 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim62Q80V85 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim62Q80V85 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Trim62Q80V85 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim62Q80V85 Gm15794-201ENSMUST00000120182 631 ntBASIC16.96■□□□□ 0.31
Trim62Q80V85 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim62Q80V85 Gm21362-201ENSMUST00000194272 928 ntBASIC16.96■□□□□ 0.31
Trim62Q80V85 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim62Q80V85 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim62Q80V85 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Trim62Q80V85 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim62Q80V85 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim62Q80V85 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim62Q80V85 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.96■□□□□ 0.3
Trim62Q80V85 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.96■□□□□ 0.3
Trim62Q80V85 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim62Q80V85 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim62Q80V85 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trim62Q80V85 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trim62Q80V85 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.96■□□□□ 0.3
Trim62Q80V85 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim62Q80V85 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Trim62Q80V85 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim62Q80V85 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Trim62Q80V85 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim62Q80V85 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Trim62Q80V85 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trim62Q80V85 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim62Q80V85 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.94■□□□□ 0.3
Trim62Q80V85 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim62Q80V85 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim62Q80V85 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms