Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Usp8Q80U87 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Usp8Q80U87 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Usp8Q80U87 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.48■□□□□ 0.23
Usp8Q80U87 Gm21814-202ENSMUST00000203277 873 ntBASIC16.48■□□□□ 0.23
Usp8Q80U87 Gm7791-201ENSMUST00000219066 539 ntBASIC16.48■□□□□ 0.23
Usp8Q80U87 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.48■□□□□ 0.23
Usp8Q80U87 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Usp8Q80U87 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp8Q80U87 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.47■□□□□ 0.23
Usp8Q80U87 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.47■□□□□ 0.23
Usp8Q80U87 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Usp8Q80U87 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.47■□□□□ 0.23
Usp8Q80U87 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.47■□□□□ 0.23
Usp8Q80U87 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.47■□□□□ 0.23
Usp8Q80U87 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Usp8Q80U87 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.47■□□□□ 0.23
Usp8Q80U87 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp8Q80U87 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp8Q80U87 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.46■□□□□ 0.23
Usp8Q80U87 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp8Q80U87 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Usp8Q80U87 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp8Q80U87 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Usp8Q80U87 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp8Q80U87 Mir5122-201ENSMUST00000175004 89 ntBASIC16.46■□□□□ 0.23
Usp8Q80U87 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp8Q80U87 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp8Q80U87 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp8Q80U87 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.46■□□□□ 0.23
Usp8Q80U87 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp8Q80U87 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp8Q80U87 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Usp8Q80U87 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Usp8Q80U87 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Usp8Q80U87 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Usp8Q80U87 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
Usp8Q80U87 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.46■□□□□ 0.22
Usp8Q80U87 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Usp8Q80U87 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Usp8Q80U87 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Usp8Q80U87 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.45■□□□□ 0.22
Usp8Q80U87 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Usp8Q80U87 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.45■□□□□ 0.22
Usp8Q80U87 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Usp8Q80U87 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.45■□□□□ 0.22
Usp8Q80U87 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.45■□□□□ 0.22
Usp8Q80U87 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Usp8Q80U87 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms