Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Gm13312-201ENSMUST00000119631 718 ntBASIC17.92■□□□□ 0.46
Ush1gQ80T11 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Gm37935-201ENSMUST00000192012 982 ntBASIC17.92■□□□□ 0.46
Ush1gQ80T11 Gm2651-201ENSMUST00000203560 838 ntBASIC17.92■□□□□ 0.46
Ush1gQ80T11 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.92■□□□□ 0.46
Ush1gQ80T11 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1gQ80T11 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.92■□□□□ 0.46
Ush1gQ80T11 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Ush1gQ80T11 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.91■□□□□ 0.46
Ush1gQ80T11 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.91■□□□□ 0.46
Ush1gQ80T11 Gm18421-201ENSMUST00000204122 625 ntBASIC17.91■□□□□ 0.46
Ush1gQ80T11 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.91■□□□□ 0.46
Ush1gQ80T11 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1gQ80T11 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.9■□□□□ 0.46
Ush1gQ80T11 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1gQ80T11 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Ush1gQ80T11 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.89■□□□□ 0.45
Ush1gQ80T11 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.89■□□□□ 0.45
Ush1gQ80T11 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.89■□□□□ 0.45
Ush1gQ80T11 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Gm6376-201ENSMUST00000209407 580 ntBASIC17.88■□□□□ 0.45
Ush1gQ80T11 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1gQ80T11 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.87■□□□□ 0.45
Ush1gQ80T11 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms