Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Exosc3Q7TQK4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Exosc3Q7TQK4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Exosc3Q7TQK4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.08■□□□□ 0.01
Exosc3Q7TQK4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Exosc3Q7TQK4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Exosc3Q7TQK4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Exosc3Q7TQK4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.08■□□□□ 0
Exosc3Q7TQK4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Gm36967-201ENSMUST00000193814 266 ntBASIC15.08■□□□□ 0
Exosc3Q7TQK4 Gm45328-201ENSMUST00000210942 917 ntBASIC15.08■□□□□ 0
Exosc3Q7TQK4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.08■□□□□ 0
Exosc3Q7TQK4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.07■□□□□ 0
Exosc3Q7TQK4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Exosc3Q7TQK4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Exosc3Q7TQK4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms