Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ShprhQ7TPQ3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.3
ShprhQ7TPQ3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
ShprhQ7TPQ3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ShprhQ7TPQ3 Gm4609-201ENSMUST00000106443 1002 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm5138-201ENSMUST00000113842 1002 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm4913-201ENSMUST00000117075 1290 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm15191-201ENSMUST00000117933 1000 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm12182-201ENSMUST00000118655 1008 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm13882-201ENSMUST00000120886 1002 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm10284-201ENSMUST00000145057 1005 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm4899-201ENSMUST00000178708 719 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm10481-201ENSMUST00000179228 1002 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm2574-201ENSMUST00000181051 1002 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm3200-201ENSMUST00000181493 1002 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm8825-201ENSMUST00000182565 998 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm4518-201ENSMUST00000182638 718 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm8330-201ENSMUST00000182754 1008 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm4575-201ENSMUST00000182991 1002 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm8709-201ENSMUST00000183230 1012 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm10293-201ENSMUST00000076317 1002 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Gm6316-201ENSMUST00000082064 1020 ntBASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ShprhQ7TPQ3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 AC159295.1-201ENSMUST00000225326 940 ntBASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Gm17968-201ENSMUST00000194902 784 ntBASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ShprhQ7TPQ3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ShprhQ7TPQ3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Gm44832-201ENSMUST00000208849 2303 ntBASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ShprhQ7TPQ3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
ShprhQ7TPQ3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
ShprhQ7TPQ3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
ShprhQ7TPQ3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ShprhQ7TPQ3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ShprhQ7TPQ3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ShprhQ7TPQ3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ShprhQ7TPQ3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ShprhQ7TPQ3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ShprhQ7TPQ3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
ShprhQ7TPQ3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms