Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Gm27000-201ENSMUST00000182943 842 ntBASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx4Q7TNK1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Mir5133-201ENSMUST00000174955 77 ntBASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Gm10517-202ENSMUST00000192970 758 ntBASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx4Q7TNK1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx4Q7TNK1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Rfx4Q7TNK1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfx4Q7TNK1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms