Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.24■□□□□ 0.51
Dhx40Q6PE54 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx40Q6PE54 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.23■□□□□ 0.51
Dhx40Q6PE54 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Mir1199-201ENSMUST00000117015 119 ntBASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Mir6982-201ENSMUST00000184354 68 ntBASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.23■□□□□ 0.51
Dhx40Q6PE54 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx40Q6PE54 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx40Q6PE54 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Gm13186-201ENSMUST00000118031 316 ntBASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.21■□□□□ 0.51
Dhx40Q6PE54 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx40Q6PE54 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Dhx40Q6PE54 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Dhx40Q6PE54 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Dhx40Q6PE54 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Dhx40Q6PE54 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Dhx40Q6PE54 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Dhx40Q6PE54 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Dhx40Q6PE54 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Dhx40Q6PE54 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Dhx40Q6PE54 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms