Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Zfp783-201ENSMUST00000095946 670 ntBASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf220Q6PDX6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Gm10418-201ENSMUST00000100943 576 ntBASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Gm8495-201ENSMUST00000188740 694 ntBASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Gm29791-202ENSMUST00000207888 369 ntBASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf220Q6PDX6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf220Q6PDX6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf220Q6PDX6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf220Q6PDX6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf220Q6PDX6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf220Q6PDX6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf220Q6PDX6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf220Q6PDX6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf220Q6PDX6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms