Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc2Q6PDG5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smarcc2Q6PDG5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Gm5587-201ENSMUST00000206270 674 ntBASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.14■□□□□ 0.65
Smarcc2Q6PDG5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc2Q6PDG5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc2Q6PDG5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms