Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ShbQ6PD21 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShbQ6PD21 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShbQ6PD21 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShbQ6PD21 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.7■□□□□ 0.42
ShbQ6PD21 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ShbQ6PD21 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.7■□□□□ 0.42
ShbQ6PD21 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.7■□□□□ 0.42
ShbQ6PD21 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShbQ6PD21 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ShbQ6PD21 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.7■□□□□ 0.42
ShbQ6PD21 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShbQ6PD21 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ShbQ6PD21 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.7■□□□□ 0.42
ShbQ6PD21 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShbQ6PD21 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShbQ6PD21 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ShbQ6PD21 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.69■□□□□ 0.42
ShbQ6PD21 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ShbQ6PD21 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.69■□□□□ 0.42
ShbQ6PD21 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ShbQ6PD21 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.69■□□□□ 0.42
ShbQ6PD21 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.69■□□□□ 0.42
ShbQ6PD21 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ShbQ6PD21 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.69■□□□□ 0.42
ShbQ6PD21 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ShbQ6PD21 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ShbQ6PD21 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.68■□□□□ 0.42
ShbQ6PD21 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.68■□□□□ 0.42
ShbQ6PD21 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Gm45747-201ENSMUST00000212203 999 ntBASIC17.68■□□□□ 0.42
ShbQ6PD21 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.68■□□□□ 0.42
ShbQ6PD21 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ShbQ6PD21 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ShbQ6PD21 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShbQ6PD21 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ShbQ6PD21 Gm15427-201ENSMUST00000117288 531 ntBASIC17.67■□□□□ 0.42
ShbQ6PD21 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.67■□□□□ 0.42
ShbQ6PD21 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.67■□□□□ 0.42
ShbQ6PD21 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.67■□□□□ 0.42
ShbQ6PD21 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.67■□□□□ 0.42
ShbQ6PD21 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.67■□□□□ 0.42
ShbQ6PD21 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
ShbQ6PD21 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ShbQ6PD21 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.67■□□□□ 0.42
ShbQ6PD21 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.67■□□□□ 0.42
ShbQ6PD21 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.67■□□□□ 0.42
ShbQ6PD21 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.67■□□□□ 0.42
ShbQ6PD21 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.67■□□□□ 0.42
ShbQ6PD21 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ShbQ6PD21 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.67■□□□□ 0.42
ShbQ6PD21 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ShbQ6PD21 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ShbQ6PD21 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShbQ6PD21 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.67■□□□□ 0.42
ShbQ6PD21 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ShbQ6PD21 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShbQ6PD21 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShbQ6PD21 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShbQ6PD21 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShbQ6PD21 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShbQ6PD21 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.66■□□□□ 0.42
ShbQ6PD21 Gm25948-201ENSMUST00000175334 112 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms