Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Mir5131-201ENSMUST00000175426 93 ntBASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Gm10576-201ENSMUST00000191927 825 ntBASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim37Q6PCX9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Gm5264-201ENSMUST00000190584 848 ntBASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim37Q6PCX9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Gm5364-201ENSMUST00000216789 889 ntBASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim37Q6PCX9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.15■□□□□ 0.5
Trim37Q6PCX9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim37Q6PCX9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Trim37Q6PCX9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trim37Q6PCX9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim37Q6PCX9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim37Q6PCX9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim37Q6PCX9 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.14■□□□□ 0.49
Trim37Q6PCX9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim37Q6PCX9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim37Q6PCX9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim37Q6PCX9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim37Q6PCX9 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms