Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rai1Q61818 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rai1Q61818 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rai1Q61818 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rai1Q61818 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rai1Q61818 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rai1Q61818 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rai1Q61818 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rai1Q61818 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rai1Q61818 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Rai1Q61818 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rai1Q61818 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rai1Q61818 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rai1Q61818 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.75■□□□□ 0.11
Rai1Q61818 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rai1Q61818 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rai1Q61818 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rai1Q61818 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rai1Q61818 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.75■□□□□ 0.11
Rai1Q61818 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rai1Q61818 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rai1Q61818 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rai1Q61818 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rai1Q61818 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rai1Q61818 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.74■□□□□ 0.11
Rai1Q61818 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rai1Q61818 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.74■□□□□ 0.11
Rai1Q61818 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.74■□□□□ 0.11
Rai1Q61818 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rai1Q61818 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rai1Q61818 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Rai1Q61818 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rai1Q61818 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rai1Q61818 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
Rai1Q61818 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Rai1Q61818 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rai1Q61818 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.74■□□□□ 0.11
Rai1Q61818 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rai1Q61818 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.73■□□□□ 0.11
Rai1Q61818 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.73■□□□□ 0.11
Rai1Q61818 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Rai1Q61818 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rai1Q61818 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rai1Q61818 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.73■□□□□ 0.11
Rai1Q61818 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Rai1Q61818 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.72■□□□□ 0.11
Rai1Q61818 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.72■□□□□ 0.11
Rai1Q61818 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Gm8655-201ENSMUST00000221159 852 ntBASIC15.72■□□□□ 0.11
Rai1Q61818 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rai1Q61818 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rai1Q61818 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.71■□□□□ 0.11
Rai1Q61818 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.71■□□□□ 0.11
Rai1Q61818 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rai1Q61818 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Rai1Q61818 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rai1Q61818 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rai1Q61818 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rai1Q61818 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Rai1Q61818 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rai1Q61818 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rai1Q61818 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rai1Q61818 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.71■□□□□ 0.11
Rai1Q61818 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.71■□□□□ 0.11
Rai1Q61818 Mir3113-201ENSMUST00000175478 76 ntBASIC15.71■□□□□ 0.11
Rai1Q61818 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rai1Q61818 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rai1Q61818 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rai1Q61818 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rai1Q61818 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rai1Q61818 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rai1Q61818 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms