Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.21□□□□□ -0.13
Hes3Q61657 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hes3Q61657 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hes3Q61657 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.21□□□□□ -0.13
Hes3Q61657 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.21□□□□□ -0.13
Hes3Q61657 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hes3Q61657 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hes3Q61657 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hes3Q61657 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hes3Q61657 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hes3Q61657 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Hes3Q61657 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Hes3Q61657 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.2□□□□□ -0.14
Hes3Q61657 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Hes3Q61657 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.2□□□□□ -0.14
Hes3Q61657 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Hes3Q61657 Gm22240-201ENSMUST00000175225 82 ntBASIC14.2□□□□□ -0.14
Hes3Q61657 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Hes3Q61657 Gm3375-201ENSMUST00000203929 796 ntBASIC14.2□□□□□ -0.14
Hes3Q61657 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.2□□□□□ -0.14
Hes3Q61657 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Hes3Q61657 Il3ra-202ENSMUST00000223589 738 ntBASIC14.2□□□□□ -0.14
Hes3Q61657 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.2□□□□□ -0.14
Hes3Q61657 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Gm10812-201ENSMUST00000099864 546 ntBASIC14.2□□□□□ -0.14
Hes3Q61657 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hes3Q61657 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.2□□□□□ -0.14
Hes3Q61657 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Hes3Q61657 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Hes3Q61657 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hes3Q61657 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Hes3Q61657 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.19□□□□□ -0.14
Hes3Q61657 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.19□□□□□ -0.14
Hes3Q61657 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.19□□□□□ -0.14
Hes3Q61657 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hes3Q61657 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.19□□□□□ -0.14
Hes3Q61657 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hes3Q61657 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hes3Q61657 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hes3Q61657 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hes3Q61657 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hes3Q61657 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hes3Q61657 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hes3Q61657 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hes3Q61657 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hes3Q61657 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Hes3Q61657 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hes3Q61657 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms