Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Ecm1Q61508 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.13■□□□□ 0.49
Ecm1Q61508 Mir6404-201ENSMUST00000183699 94 ntBASIC18.13■□□□□ 0.49
Ecm1Q61508 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.13■□□□□ 0.49
Ecm1Q61508 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ecm1Q61508 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Ecm1Q61508 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.12■□□□□ 0.49
Ecm1Q61508 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Gm6736-201ENSMUST00000166583 948 ntBASIC18.12■□□□□ 0.49
Ecm1Q61508 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Ecm1Q61508 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.12■□□□□ 0.49
Ecm1Q61508 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Gm43575-201ENSMUST00000196420 516 ntBASIC18.12■□□□□ 0.49
Ecm1Q61508 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.12■□□□□ 0.49
Ecm1Q61508 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.12■□□□□ 0.49
Ecm1Q61508 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ecm1Q61508 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.12■□□□□ 0.49
Ecm1Q61508 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ecm1Q61508 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ecm1Q61508 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.11■□□□□ 0.49
Ecm1Q61508 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.11■□□□□ 0.49
Ecm1Q61508 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.11■□□□□ 0.49
Ecm1Q61508 Gm2756-201ENSMUST00000195851 400 ntBASIC18.11■□□□□ 0.49
Ecm1Q61508 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.11■□□□□ 0.49
Ecm1Q61508 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.11■□□□□ 0.49
Ecm1Q61508 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Ecm1Q61508 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ecm1Q61508 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.11■□□□□ 0.49
Ecm1Q61508 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.11■□□□□ 0.49
Ecm1Q61508 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ecm1Q61508 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.1■□□□□ 0.49
Ecm1Q61508 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ecm1Q61508 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ecm1Q61508 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ecm1Q61508 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ecm1Q61508 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.1■□□□□ 0.49
Ecm1Q61508 Gm4995-201ENSMUST00000117247 432 ntBASIC18.1■□□□□ 0.49
Ecm1Q61508 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.1■□□□□ 0.49
Ecm1Q61508 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.1■□□□□ 0.49
Ecm1Q61508 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ecm1Q61508 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Ecm1Q61508 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ecm1Q61508 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ecm1Q61508 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ecm1Q61508 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ecm1Q61508 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ecm1Q61508 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ecm1Q61508 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.09■□□□□ 0.49
Ecm1Q61508 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Ecm1Q61508 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.09■□□□□ 0.49
Ecm1Q61508 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Ecm1Q61508 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms