Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ift88Q61371 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ift88Q61371 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ift88Q61371 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ift88Q61371 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Actl10-202ENSMUST00000226583 1501 ntBASIC18.18■□□□□ 0.5
Ift88Q61371 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.18■□□□□ 0.5
Ift88Q61371 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ift88Q61371 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.18■□□□□ 0.5
Ift88Q61371 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Ift88Q61371 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ift88Q61371 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.17■□□□□ 0.5
Ift88Q61371 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.17■□□□□ 0.5
Ift88Q61371 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Ift88Q61371 Gm3375-201ENSMUST00000203929 796 ntBASIC18.17■□□□□ 0.5
Ift88Q61371 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.17■□□□□ 0.5
Ift88Q61371 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ift88Q61371 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ift88Q61371 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ift88Q61371 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.16■□□□□ 0.5
Ift88Q61371 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ift88Q61371 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ift88Q61371 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.16■□□□□ 0.5
Ift88Q61371 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ift88Q61371 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Ift88Q61371 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.16■□□□□ 0.5
Ift88Q61371 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ift88Q61371 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Ift88Q61371 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ift88Q61371 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.16■□□□□ 0.5
Ift88Q61371 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ift88Q61371 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ift88Q61371 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ift88Q61371 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ift88Q61371 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ift88Q61371 Gm13186-201ENSMUST00000118031 316 ntBASIC18.15■□□□□ 0.5
Ift88Q61371 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.15■□□□□ 0.5
Ift88Q61371 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ift88Q61371 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ift88Q61371 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ift88Q61371 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ift88Q61371 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ift88Q61371 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ift88Q61371 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ift88Q61371 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Ift88Q61371 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.14■□□□□ 0.49
Ift88Q61371 Gm715-201ENSMUST00000117865 831 ntBASIC18.14■□□□□ 0.49
Ift88Q61371 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.14■□□□□ 0.49
Ift88Q61371 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.14■□□□□ 0.49
Ift88Q61371 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms