Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sim1Q61045 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sim1Q61045 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.24■□□□□ 0.19
Sim1Q61045 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Sim1Q61045 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Gm2651-201ENSMUST00000203560 838 ntBASIC16.24■□□□□ 0.19
Sim1Q61045 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.24■□□□□ 0.19
Sim1Q61045 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sim1Q61045 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Sim1Q61045 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.23■□□□□ 0.19
Sim1Q61045 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.23■□□□□ 0.19
Sim1Q61045 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Sim1Q61045 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim1Q61045 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sim1Q61045 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.22■□□□□ 0.19
Sim1Q61045 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim1Q61045 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.22■□□□□ 0.19
Sim1Q61045 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim1Q61045 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sim1Q61045 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim1Q61045 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim1Q61045 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sim1Q61045 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim1Q61045 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sim1Q61045 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim1Q61045 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.22■□□□□ 0.19
Sim1Q61045 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.22■□□□□ 0.19
Sim1Q61045 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Sim1Q61045 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim1Q61045 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim1Q61045 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim1Q61045 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sim1Q61045 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim1Q61045 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sim1Q61045 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim1Q61045 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sim1Q61045 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sim1Q61045 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 Phf7-203ENSMUST00000226565 1971 ntBASIC16.21■□□□□ 0.19
Sim1Q61045 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.21■□□□□ 0.19
Sim1Q61045 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.21■□□□□ 0.19
Sim1Q61045 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.21■□□□□ 0.19
Sim1Q61045 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.21■□□□□ 0.19
Sim1Q61045 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sim1Q61045 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Sim1Q61045 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Sim1Q61045 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sim1Q61045 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sim1Q61045 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms