Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Gm13312-201ENSMUST00000119631 718 ntBASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Mir8098-201ENSMUST00000184011 137 ntBASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Gm43347-201ENSMUST00000200226 580 ntBASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Shroom1Q5SX79 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom1Q5SX79 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom1Q5SX79 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom1Q5SX79 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom1Q5SX79 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom1Q5SX79 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom1Q5SX79 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.41■□□□□ 0.38
Shroom1Q5SX79 Rprl3-201ENSMUST00000157400 290 ntBASIC17.41■□□□□ 0.38
Shroom1Q5SX79 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shroom1Q5SX79 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom1Q5SX79 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.41■□□□□ 0.38
Shroom1Q5SX79 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom1Q5SX79 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom1Q5SX79 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shroom1Q5SX79 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shroom1Q5SX79 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Gm13884-201ENSMUST00000118103 829 ntBASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom1Q5SX79 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms