Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.38□□□□□ -0.11
Vmn1r223Q5SSA0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmn1r223Q5SSA0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Mir5122-201ENSMUST00000175004 89 ntBASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Gm37055-201ENSMUST00000191866 133 ntBASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmn1r223Q5SSA0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Gm12085-201ENSMUST00000119263 940 ntBASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Gm18958-201ENSMUST00000174258 762 ntBASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Timm23-208ENSMUST00000226683 750 ntBASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Odf3b-204ENSMUST00000227834 930 ntBASIC14.35□□□□□ -0.11
Vmn1r223Q5SSA0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms