Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-4Q5R1H9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Sybu-209ENSMUST00000228639 4113 ntBASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-4Q5R1H9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Gm45417-201ENSMUST00000209533 758 ntBASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms