Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-2Q5R1B6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav8d-2Q5R1B6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-2Q5R1B6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-2Q5R1B6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-2Q5R1B6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav8d-2Q5R1B6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-2Q5R1B6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-2Q5R1B6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Gm11764-201ENSMUST00000120221 623 ntBASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-2Q5R1B6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Gm11025-201ENSMUST00000140773 466 ntBASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.95■□□□□ 0.14
Trav8d-2Q5R1B6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Gm14057-201ENSMUST00000120631 482 ntBASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav8d-2Q5R1B6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Chchd1-203ENSMUST00000224633 557 ntBASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8d-2Q5R1B6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms