Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Gm5866-201ENSMUST00000177881 973 ntBASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col27a1Q5QNQ9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col27a1Q5QNQ9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.77■□□□□ 0.12
Col27a1Q5QNQ9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Gm27301-201ENSMUST00000184012 127 ntBASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col27a1Q5QNQ9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 Mir449b-201ENSMUST00000104833 80 ntBASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col27a1Q5QNQ9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col27a1Q5QNQ9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col27a1Q5QNQ9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col27a1Q5QNQ9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms