Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38aQ4FK66 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.11■□□□□ 0.65
Prpf38aQ4FK66 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Prpf38aQ4FK66 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38aQ4FK66 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Prpf38aQ4FK66 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38aQ4FK66 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38aQ4FK66 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38aQ4FK66 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.11■□□□□ 0.65
Prpf38aQ4FK66 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38aQ4FK66 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38aQ4FK66 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Gm11452-201ENSMUST00000122376 690 ntBASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38aQ4FK66 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38aQ4FK66 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf38aQ4FK66 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf38aQ4FK66 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Prpf38aQ4FK66 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf38aQ4FK66 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Prpf38aQ4FK66 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf38aQ4FK66 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf38aQ4FK66 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf38aQ4FK66 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.08■□□□□ 0.65
Prpf38aQ4FK66 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf38aQ4FK66 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf38aQ4FK66 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.08■□□□□ 0.64
Prpf38aQ4FK66 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.08■□□□□ 0.64
Prpf38aQ4FK66 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.08■□□□□ 0.64
Prpf38aQ4FK66 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf38aQ4FK66 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf38aQ4FK66 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf38aQ4FK66 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38aQ4FK66 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms