Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Gm15920-201ENSMUST00000118998 402 ntBASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Gm13616-201ENSMUST00000120600 222 ntBASIC20.36■□□□□ 0.85
Shank3Q4ACU6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank3Q4ACU6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank3Q4ACU6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank3Q4ACU6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank3Q4ACU6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Shank3Q4ACU6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.35■□□□□ 0.85
Shank3Q4ACU6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank3Q4ACU6 Gm45167-201ENSMUST00000208007 322 ntBASIC20.35■□□□□ 0.85
Shank3Q4ACU6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank3Q4ACU6 Gm8396-201ENSMUST00000057361 823 ntBASIC20.35■□□□□ 0.85
Shank3Q4ACU6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shank3Q4ACU6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Shank3Q4ACU6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank3Q4ACU6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank3Q4ACU6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shank3Q4ACU6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank3Q4ACU6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Shank3Q4ACU6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.34■□□□□ 0.85
Shank3Q4ACU6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC20.34■□□□□ 0.85
Shank3Q4ACU6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC20.34■□□□□ 0.85
Shank3Q4ACU6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank3Q4ACU6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank3Q4ACU6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.34■□□□□ 0.85
Shank3Q4ACU6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Shank3Q4ACU6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank3Q4ACU6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank3Q4ACU6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank3Q4ACU6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank3Q4ACU6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank3Q4ACU6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Shank3Q4ACU6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.33■□□□□ 0.85
Shank3Q4ACU6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.33■□□□□ 0.85
Shank3Q4ACU6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank3Q4ACU6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank3Q4ACU6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Shank3Q4ACU6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shank3Q4ACU6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shank3Q4ACU6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.33■□□□□ 0.84
Shank3Q4ACU6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC20.33■□□□□ 0.84
Shank3Q4ACU6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC20.33■□□□□ 0.84
Shank3Q4ACU6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shank3Q4ACU6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC20.32■□□□□ 0.84
Shank3Q4ACU6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Shank3Q4ACU6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms