Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap2Q3V1H1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap2Q3V1H1 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.85■□□□□ 0.61
Ckap2Q3V1H1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap2Q3V1H1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap2Q3V1H1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap2Q3V1H1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap2Q3V1H1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap2Q3V1H1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap2Q3V1H1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap2Q3V1H1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.84■□□□□ 0.61
Ckap2Q3V1H1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap2Q3V1H1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap2Q3V1H1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap2Q3V1H1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.84■□□□□ 0.61
Ckap2Q3V1H1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap2Q3V1H1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.84■□□□□ 0.61
Ckap2Q3V1H1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap2Q3V1H1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap2Q3V1H1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap2Q3V1H1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ckap2Q3V1H1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.84■□□□□ 0.61
Ckap2Q3V1H1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ckap2Q3V1H1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ckap2Q3V1H1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ckap2Q3V1H1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ckap2Q3V1H1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Ckap2Q3V1H1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ckap2Q3V1H1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ckap2Q3V1H1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Ckap2Q3V1H1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ckap2Q3V1H1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ckap2Q3V1H1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ckap2Q3V1H1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap2Q3V1H1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap2Q3V1H1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms