Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Gm26039-201ENSMUST00000158152 144 ntBASIC18.69■□□□□ 0.58
Gm28047Q3US59 Gm43799-201ENSMUST00000201845 579 ntBASIC18.69■□□□□ 0.58
Gm28047Q3US59 Gm45058-201ENSMUST00000205810 766 ntBASIC18.69■□□□□ 0.58
Gm28047Q3US59 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.69■□□□□ 0.58
Gm28047Q3US59 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28047Q3US59 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28047Q3US59 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Gm36967-201ENSMUST00000193814 266 ntBASIC18.67■□□□□ 0.58
Gm28047Q3US59 Gm18959-201ENSMUST00000208954 655 ntBASIC18.67■□□□□ 0.58
Gm28047Q3US59 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.67■□□□□ 0.58
Gm28047Q3US59 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Gm28047Q3US59 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.67■□□□□ 0.58
Gm28047Q3US59 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28047Q3US59 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28047Q3US59 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28047Q3US59 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28047Q3US59 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28047Q3US59 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28047Q3US59 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.65■□□□□ 0.58
Gm28047Q3US59 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28047Q3US59 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28047Q3US59 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.65■□□□□ 0.58
Gm28047Q3US59 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.65■□□□□ 0.58
Gm28047Q3US59 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.65■□□□□ 0.58
Gm28047Q3US59 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.65■□□□□ 0.58
Gm28047Q3US59 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.65■□□□□ 0.58
Gm28047Q3US59 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.65■□□□□ 0.58
Gm28047Q3US59 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms