Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cks1brtQ3UNC9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1brtQ3UNC9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Smad6-203ENSMUST00000179458 273 ntBASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms