Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Gm44430-201ENSMUST00000203376 995 ntBASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.67■□□□□ 0.26
Naf1Q3UMQ8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Gm13312-201ENSMUST00000119631 718 ntBASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Naf1Q3UMQ8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Naf1Q3UMQ8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Naf1Q3UMQ8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Gm15372-201ENSMUST00000120729 834 ntBASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Gm27459-201ENSMUST00000184860 107 ntBASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Naf1Q3UMQ8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Naf1Q3UMQ8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms