Protein–RNA interactions for Protein: Q3ULW6

Ccdc33, Coiled-coil domain-containing protein 33, mousemouse

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc33Q3ULW6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Gm5264-201ENSMUST00000190584 848 ntBASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Idnk-204ENSMUST00000226010 1898 ntBASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc33Q3ULW6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc33Q3ULW6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc33Q3ULW6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc33Q3ULW6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc33Q3ULW6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc33Q3ULW6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc33Q3ULW6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc33Q3ULW6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc33Q3ULW6 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.33■□□□□ 0.52
Ccdc33Q3ULW6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc33Q3ULW6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.33■□□□□ 0.52
Ccdc33Q3ULW6 Gm6736-201ENSMUST00000166583 948 ntBASIC18.33■□□□□ 0.52
Ccdc33Q3ULW6 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.33■□□□□ 0.52
Ccdc33Q3ULW6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc33Q3ULW6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc33Q3ULW6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccdc33Q3ULW6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc33Q3ULW6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc33Q3ULW6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc33Q3ULW6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm12350-201ENSMUST00000121208 462 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm44357-201ENSMUST00000195897 142 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm19658-201ENSMUST00000196231 138 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm44367-201ENSMUST00000196836 138 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm44350-201ENSMUST00000197197 138 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm44390-201ENSMUST00000197533 144 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm44313-201ENSMUST00000198018 138 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm44486-201ENSMUST00000198508 138 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm44454-201ENSMUST00000198541 138 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm44314-201ENSMUST00000199263 138 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm44394-201ENSMUST00000199558 138 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm44484-201ENSMUST00000199873 138 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm44466-201ENSMUST00000200264 138 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gm44359-201ENSMUST00000200671 138 ntBASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc33Q3ULW6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Gm15165-201ENSMUST00000118140 502 ntBASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Gm13312-201ENSMUST00000119631 718 ntBASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Mir8112-201ENSMUST00000184382 131 ntBASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc33Q3ULW6 Haglr-201ENSMUST00000100000 2085 ntBASIC18.3■□□□□ 0.52
Ccdc33Q3ULW6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc33Q3ULW6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ccdc33Q3ULW6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc33Q3ULW6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.3■□□□□ 0.52
Ccdc33Q3ULW6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ccdc33Q3ULW6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ccdc33Q3ULW6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc33Q3ULW6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc33Q3ULW6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms