Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.08■□□□□ 0.01
Spg11Q3UHA3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Spg11Q3UHA3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Spg11Q3UHA3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.08■□□□□ 0.01
Spg11Q3UHA3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Spg11Q3UHA3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Spg11Q3UHA3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Spg11Q3UHA3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Spg11Q3UHA3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Spg11Q3UHA3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Spg11Q3UHA3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Spg11Q3UHA3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Spg11Q3UHA3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.08■□□□□ 0
Spg11Q3UHA3 Mir1938-201ENSMUST00000158746 100 ntBASIC15.08■□□□□ 0
Spg11Q3UHA3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Spg11Q3UHA3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Spg11Q3UHA3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Spg11Q3UHA3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Spg11Q3UHA3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.08■□□□□ 0
Spg11Q3UHA3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Spg11Q3UHA3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.08■□□□□ 0
Spg11Q3UHA3 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.08■□□□□ 0
Spg11Q3UHA3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.07■□□□□ 0
Spg11Q3UHA3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.07■□□□□ 0
Spg11Q3UHA3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.07■□□□□ 0
Spg11Q3UHA3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.07■□□□□ 0
Spg11Q3UHA3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.07■□□□□ 0
Spg11Q3UHA3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.07■□□□□ 0
Spg11Q3UHA3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.07■□□□□ 0
Spg11Q3UHA3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm22065-201ENSMUST00000103753 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm22066-201ENSMUST00000103761 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm24932-201ENSMUST00000103763 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm24115-201ENSMUST00000103799 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm22190-201ENSMUST00000103827 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm22191-201ENSMUST00000103831 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm24721-201ENSMUST00000103849 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm28018-201ENSMUST00000103869 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm26399-201ENSMUST00000103937 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm25349-201ENSMUST00000177728 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm23616-201ENSMUST00000177797 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm25871-201ENSMUST00000177816 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm24752-201ENSMUST00000178240 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm24496-201ENSMUST00000178287 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm25649-201ENSMUST00000178476 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm25548-201ENSMUST00000178681 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm23147-201ENSMUST00000178841 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm26095-201ENSMUST00000179270 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm22171-201ENSMUST00000179283 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm23936-201ENSMUST00000179354 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm22619-201ENSMUST00000179516 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm25255-201ENSMUST00000179579 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm24755-201ENSMUST00000179691 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm26506-201ENSMUST00000179692 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm25086-201ENSMUST00000179931 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm23243-201ENSMUST00000180047 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm24659-201ENSMUST00000180212 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm24169-201ENSMUST00000180244 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm23689-201ENSMUST00000180354 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm27359-201ENSMUST00000184153 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm27785-201ENSMUST00000184268 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm27466-201ENSMUST00000184396 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Gm27703-201ENSMUST00000184836 110 ntBASIC15.06■□□□□ 0
Spg11Q3UHA3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms