Protein–RNA interactions for Protein: Q3UH99

Shisa6, Protein shisa-6 homolog, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa6Q3UH99 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Gm27525-201ENSMUST00000184465 107 ntBASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa6Q3UH99 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa6Q3UH99 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa6Q3UH99 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa6Q3UH99 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa6Q3UH99 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa6Q3UH99 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa6Q3UH99 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.77□□□□□ -0.04
Shisa6Q3UH99 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.77□□□□□ -0.04
Shisa6Q3UH99 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa6Q3UH99 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Shisa6Q3UH99 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa6Q3UH99 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Shisa6Q3UH99 Gm2651-201ENSMUST00000203560 838 ntBASIC14.77□□□□□ -0.05
Shisa6Q3UH99 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shisa6Q3UH99 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shisa6Q3UH99 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shisa6Q3UH99 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.77□□□□□ -0.05
Shisa6Q3UH99 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Shisa6Q3UH99 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shisa6Q3UH99 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa6Q3UH99 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Gm10060-201ENSMUST00000212002 111 ntBASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa6Q3UH99 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa6Q3UH99 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa6Q3UH99 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa6Q3UH99 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa6Q3UH99 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa6Q3UH99 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa6Q3UH99 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa6Q3UH99 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms