Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lins1Q3U1D0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lins1Q3U1D0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lins1Q3U1D0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lins1Q3U1D0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lins1Q3U1D0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lins1Q3U1D0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lins1Q3U1D0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Gm44454-201ENSMUST00000198541 138 ntBASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lins1Q3U1D0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lins1Q3U1D0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Gm18733-201ENSMUST00000173950 856 ntBASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Gm18195-201ENSMUST00000207604 706 ntBASIC19.45■□□□□ 0.7
Lins1Q3U1D0 AW822252-206ENSMUST00000208904 237 ntBASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lins1Q3U1D0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Rps4l-201ENSMUST00000071745 943 ntBASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lins1Q3U1D0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lins1Q3U1D0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lins1Q3U1D0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lins1Q3U1D0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms