Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Gm36967-201ENSMUST00000193814 266 ntBASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cul4aQ3TCH7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cul4aQ3TCH7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cul4aQ3TCH7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cul4aQ3TCH7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Cul4aQ3TCH7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cul4aQ3TCH7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.21■□□□□ 0.34
Cul4aQ3TCH7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms