Protein–RNA interactions for Protein: Q0P5V2

Sobp, Sine oculis-binding protein homolog, mousemouse

Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SobpQ0P5V2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SobpQ0P5V2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SobpQ0P5V2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SobpQ0P5V2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SobpQ0P5V2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SobpQ0P5V2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SobpQ0P5V2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SobpQ0P5V2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SobpQ0P5V2 Gm5177-201ENSMUST00000183092 997 ntBASIC18.68■□□□□ 0.58
SobpQ0P5V2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SobpQ0P5V2 Gm20553-201ENSMUST00000204205 844 ntBASIC18.68■□□□□ 0.58
SobpQ0P5V2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SobpQ0P5V2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SobpQ0P5V2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SobpQ0P5V2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SobpQ0P5V2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SobpQ0P5V2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SobpQ0P5V2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SobpQ0P5V2 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.67■□□□□ 0.58
SobpQ0P5V2 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.67■□□□□ 0.58
SobpQ0P5V2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.67■□□□□ 0.58
SobpQ0P5V2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.67■□□□□ 0.58
SobpQ0P5V2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SobpQ0P5V2 Gm10253-201ENSMUST00000194270 940 ntBASIC18.67■□□□□ 0.58
SobpQ0P5V2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.67■□□□□ 0.58
SobpQ0P5V2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SobpQ0P5V2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SobpQ0P5V2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.67■□□□□ 0.58
SobpQ0P5V2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SobpQ0P5V2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SobpQ0P5V2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SobpQ0P5V2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SobpQ0P5V2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm22065-201ENSMUST00000103753 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm22066-201ENSMUST00000103761 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm24932-201ENSMUST00000103763 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm24115-201ENSMUST00000103799 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm22190-201ENSMUST00000103827 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm22191-201ENSMUST00000103831 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm24721-201ENSMUST00000103849 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm28018-201ENSMUST00000103869 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm26399-201ENSMUST00000103937 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm25349-201ENSMUST00000177728 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm23616-201ENSMUST00000177797 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm25871-201ENSMUST00000177816 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm24752-201ENSMUST00000178240 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm24496-201ENSMUST00000178287 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm25649-201ENSMUST00000178476 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm25548-201ENSMUST00000178681 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm23147-201ENSMUST00000178841 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm26095-201ENSMUST00000179270 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm22171-201ENSMUST00000179283 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm23936-201ENSMUST00000179354 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm22619-201ENSMUST00000179516 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm25255-201ENSMUST00000179579 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm24755-201ENSMUST00000179691 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm26506-201ENSMUST00000179692 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm25086-201ENSMUST00000179931 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm23243-201ENSMUST00000180047 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm24659-201ENSMUST00000180212 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm24169-201ENSMUST00000180244 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm23689-201ENSMUST00000180354 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm27359-201ENSMUST00000184153 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm27785-201ENSMUST00000184268 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm27466-201ENSMUST00000184396 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gm27703-201ENSMUST00000184836 110 ntBASIC18.66■□□□□ 0.58
SobpQ0P5V2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SobpQ0P5V2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SobpQ0P5V2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.65■□□□□ 0.58
SobpQ0P5V2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SobpQ0P5V2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms