Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Mir1199-201ENSMUST00000117015 119 ntBASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptchd3Q0EEE2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Gm10812-201ENSMUST00000099864 546 ntBASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptchd3Q0EEE2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ptchd3Q0EEE2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms