Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Hspg2Q05793 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.06□□□□□ -0.48
Hspg2Q05793 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hspg2Q05793 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.06□□□□□ -0.48
Hspg2Q05793 Gm4459-201ENSMUST00000118750 468 ntBASIC12.06□□□□□ -0.48
Hspg2Q05793 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hspg2Q05793 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.05□□□□□ -0.48
Hspg2Q05793 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Hspg2Q05793 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hspg2Q05793 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.05□□□□□ -0.48
Hspg2Q05793 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.05□□□□□ -0.48
Hspg2Q05793 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.05□□□□□ -0.48
Hspg2Q05793 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hspg2Q05793 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hspg2Q05793 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.05□□□□□ -0.48
Hspg2Q05793 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hspg2Q05793 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.05□□□□□ -0.48
Hspg2Q05793 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hspg2Q05793 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.05□□□□□ -0.48
Hspg2Q05793 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hspg2Q05793 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.05□□□□□ -0.48
Hspg2Q05793 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hspg2Q05793 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hspg2Q05793 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hspg2Q05793 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hspg2Q05793 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.04□□□□□ -0.48
Hspg2Q05793 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Hspg2Q05793 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hspg2Q05793 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hspg2Q05793 Gm4899-201ENSMUST00000178708 719 ntBASIC12.04□□□□□ -0.48
Hspg2Q05793 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.04□□□□□ -0.48
Hspg2Q05793 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Hspg2Q05793 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.04□□□□□ -0.48
Hspg2Q05793 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hspg2Q05793 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hspg2Q05793 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Hspg2Q05793 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hspg2Q05793 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hspg2Q05793 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.03□□□□□ -0.48
Hspg2Q05793 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.03□□□□□ -0.48
Hspg2Q05793 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Gm27300-201ENSMUST00000184085 97 ntBASIC12.03□□□□□ -0.48
Hspg2Q05793 Gm27335-201ENSMUST00000184758 97 ntBASIC12.03□□□□□ -0.48
Hspg2Q05793 Gm29707-201ENSMUST00000196325 491 ntBASIC12.03□□□□□ -0.48
Hspg2Q05793 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.03□□□□□ -0.48
Hspg2Q05793 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.03□□□□□ -0.48
Hspg2Q05793 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hspg2Q05793 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Hspg2Q05793 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hspg2Q05793 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.02□□□□□ -0.48
Hspg2Q05793 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.02□□□□□ -0.48
Hspg2Q05793 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hspg2Q05793 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hspg2Q05793 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Hspg2Q05793 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hspg2Q05793 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Hspg2Q05793 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hspg2Q05793 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hspg2Q05793 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hspg2Q05793 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hspg2Q05793 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Gm25406-201ENSMUST00000157599 105 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms